Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC31.06■■■□□ 2.56
CUX2O14529 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CUX2O14529 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CUX2O14529 TSPY16P-201ENST00000449843 468 ntBASIC31.06■■■□□ 2.56
CUX2O14529 AC108073.2-201ENST00000464002 357 ntBASIC31.06■■■□□ 2.56
CUX2O14529 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
CUX2O14529 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CUX2O14529 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC31.06■■■□□ 2.56
CUX2O14529 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CUX2O14529 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC31.06■■■□□ 2.56
CUX2O14529 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC31.05■■■□□ 2.56
CUX2O14529 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC31.05■■■□□ 2.56
CUX2O14529 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CUX2O14529 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CUX2O14529 KRT8P32-201ENST00000512863 1461 ntBASIC31.05■■■□□ 2.56
CUX2O14529 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CUX2O14529 FAM58CP-201ENST00000435741 640 ntBASIC31.05■■■□□ 2.56
CUX2O14529 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CUX2O14529 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 AC008761.3-201ENST00000624803 892 ntBASIC31.05■■■□□ 2.56
CUX2O14529 AL358472.5-202ENST00000641448 1267 ntBASIC31.05■■■□□ 2.56
CUX2O14529 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 AL137060.1-201ENST00000618151 2648 ntBASIC31.05■■■□□ 2.56
CUX2O14529 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
CUX2O14529 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC31.04■■■□□ 2.56
CUX2O14529 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC31.04■■■□□ 2.56
CUX2O14529 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC31.04■■■□□ 2.56
CUX2O14529 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CUX2O14529 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC31.04■■■□□ 2.56
CUX2O14529 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CUX2O14529 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.04■■■□□ 2.56
CUX2O14529 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC31.04■■■□□ 2.56
CUX2O14529 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CUX2O14529 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CUX2O14529 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CUX2O14529 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 AC068472.1-201ENST00000474589 881 ntBASIC31.03■■■□□ 2.56
CUX2O14529 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 MIR4751-201ENST00000578027 74 ntBASIC31.03■■■□□ 2.56
CUX2O14529 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC31.03■■■□□ 2.56
CUX2O14529 AL022326.1-202ENST00000641533 845 ntBASIC31.03■■■□□ 2.56
CUX2O14529 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC31.03■■■□□ 2.56
CUX2O14529 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 AC079776.2-201ENST00000641154 1609 ntBASIC31.03■■■□□ 2.56
CUX2O14529 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CUX2O14529 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC31.03■■■□□ 2.56
CUX2O14529 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CUX2O14529 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC31.02■■■□□ 2.56
CUX2O14529 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC31.02■■■□□ 2.56
CUX2O14529 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC31.02■■■□□ 2.56
CUX2O14529 AL353135.1-201ENST00000606729 504 ntBASIC31.02■■■□□ 2.56
CUX2O14529 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC31.02■■■□□ 2.56
CUX2O14529 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CUX2O14529 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC31.01■■■□□ 2.56
CUX2O14529 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC31.01■■■□□ 2.56
CUX2O14529 VN2R19P-201ENST00000442399 1052 ntBASIC31.01■■■□□ 2.56
CUX2O14529 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CUX2O14529 DUX4L27-201ENST00000554796 1261 ntBASIC31.01■■■□□ 2.56
CUX2O14529 COQ6-210ENST00000554920 649 ntTSL 3 BASIC31.01■■■□□ 2.56
CUX2O14529 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC31.01■■■□□ 2.55
CUX2O14529 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 UGT1A2P-201ENST00000454886 866 ntBASIC31.01■■■□□ 2.55
CUX2O14529 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CUX2O14529 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC31.01■■■□□ 2.55
CUX2O14529 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
CUX2O14529 AC073592.5-201ENST00000624854 528 ntBASIC31.01■■■□□ 2.55
CUX2O14529 AC105339.1-204ENST00000636249 355 ntBASIC31.01■■■□□ 2.55
CUX2O14529 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC31■■■□□ 2.55
CUX2O14529 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms