Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFA4O00483 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA4O00483 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.02□□□□□ -0.17
NDUFA4O00483 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 AL024508.2-201ENST00000607749 1894 ntBASIC14.01□□□□□ -0.17
NDUFA4O00483 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 PHGDH-209ENST00000641074 1780 ntBASIC14.01□□□□□ -0.17
NDUFA4O00483 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NDUFA4O00483 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NDUFA4O00483 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.01□□□□□ -0.17
NDUFA4O00483 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NDUFA4O00483 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA4O00483 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA4O00483 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA4O00483 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NDUFA4O00483 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NDUFA4O00483 AL096828.2-201ENST00000567259 1965 ntBASIC14□□□□□ -0.17
NDUFA4O00483 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 AC099343.3-201ENST00000605834 2503 ntBASIC14□□□□□ -0.17
NDUFA4O00483 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14□□□□□ -0.17
NDUFA4O00483 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14□□□□□ -0.17
NDUFA4O00483 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA4O00483 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14□□□□□ -0.17
NDUFA4O00483 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
NDUFA4O00483 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 STARP1-201ENST00000397973 869 ntBASIC14□□□□□ -0.17
NDUFA4O00483 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14□□□□□ -0.17
NDUFA4O00483 RASA4DP-201ENST00000460726 1199 ntBASIC14□□□□□ -0.17
NDUFA4O00483 YBX1P2-201ENST00000489612 999 ntBASIC14□□□□□ -0.17
NDUFA4O00483 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14□□□□□ -0.17
NDUFA4O00483 AL441883.1-201ENST00000566170 1045 ntBASIC14□□□□□ -0.17
NDUFA4O00483 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NDUFA4O00483 AC139887.4-201ENST00000607877 719 ntBASIC14□□□□□ -0.17
NDUFA4O00483 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NDUFA4O00483 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NDUFA4O00483 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14□□□□□ -0.17
NDUFA4O00483 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFA4O00483 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA4O00483 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NDUFA4O00483 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.99□□□□□ -0.17
NDUFA4O00483 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA4O00483 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA4O00483 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFA4O00483 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA4O00483 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NDUFA4O00483 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms