Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AL353708.3-201ENST00000610272 989 ntBASIC16.92■□□□□ 0.3
TNFRSF11BO00300 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 AC133681.1-201ENST00000465482 601 ntBASIC16.91■□□□□ 0.3
TNFRSF11BO00300 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF11BO00300 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 KRT16P1-201ENST00000399124 1418 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 KRT8P50-201ENST00000562022 1438 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC034236.2-201ENST00000606662 1610 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC008622.2-201ENST00000617006 1229 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AL031985.4-201ENST00000642138 673 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC009053.2-201ENST00000563701 2365 ntBASIC16.9■□□□□ 0.3
TNFRSF11BO00300 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF11BO00300 AC006116.8-202ENST00000587620 1550 ntBASIC16.89■□□□□ 0.3
TNFRSF11BO00300 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TNFRSF11BO00300 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.89■□□□□ 0.3
TNFRSF11BO00300 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
TNFRSF11BO00300 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TNFRSF11BO00300 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TNFRSF11BO00300 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 AC026271.3-201ENST00000571884 352 ntBASIC16.89■□□□□ 0.29
TNFRSF11BO00300 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.29
TNFRSF11BO00300 CR392000.1-201ENST00000624770 1228 ntBASIC16.89■□□□□ 0.29
TNFRSF11BO00300 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF11BO00300 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms