Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 KRT8P50-201ENST00000562022 1438 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 AL627223.1-201ENST00000416693 442 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 RPS2P32-201ENST00000439199 892 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 RN7SL692P-201ENST00000464677 288 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 SPDYE22P-201ENST00000582158 798 ntBASIC14.07□□□□□ -0.16
COL6A5A8TX70 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.07□□□□□ -0.16
COL6A5A8TX70 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL6A5A8TX70 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 KRT8P32-201ENST00000512863 1461 ntBASIC14.06□□□□□ -0.16
COL6A5A8TX70 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 IGLL3P-201ENST00000412472 434 ntBASIC14.06□□□□□ -0.16
COL6A5A8TX70 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 AL512356.2-201ENST00000546955 174 ntBASIC14.06□□□□□ -0.16
COL6A5A8TX70 AL662799.1-202ENST00000614205 422 ntBASIC14.06□□□□□ -0.16
COL6A5A8TX70 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL6A5A8TX70 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COL6A5A8TX70 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.05□□□□□ -0.16
COL6A5A8TX70 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 AC116407.2-201ENST00000613639 860 ntBASIC14.05□□□□□ -0.16
COL6A5A8TX70 AC010654.1-201ENST00000615722 808 ntBASIC14.05□□□□□ -0.16
COL6A5A8TX70 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A5A8TX70 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.05□□□□□ -0.16
COL6A5A8TX70 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.05□□□□□ -0.16
COL6A5A8TX70 HILS1-202ENST00000545329 423 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms