Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 BNIP3P18-201ENST00000593976 575 ntBASIC18.52■□□□□ 0.56
TBC1D3BA6NDS4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3BA6NDS4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3BA6NDS4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.52■□□□□ 0.55
TBC1D3BA6NDS4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AP000347.1-202ENST00000435868 847 ntBASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AC068472.1-201ENST00000474589 881 ntBASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AC106795.1-205ENST00000512851 1056 ntBASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AF238378.1-201ENST00000526806 358 ntBASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 SLC25A6P4-201ENST00000586535 553 ntBASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TBC1D3BA6NDS4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 MRPL3P1-201ENST00000400109 1033 ntBASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3BA6NDS4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 LINC00602-201ENST00000629776 2065 ntBASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3BA6NDS4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms