Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 CROCCP5-201ENST00000436658 830 ntBASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 AL121832.2-201ENST00000610979 668 ntBASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.68■□□□□ 0.1
MEIS3P1A6NDR6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 NBPF21P-201ENST00000425093 1451 ntBASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 POU5F1P3-201ENST00000428824 1078 ntBASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 RARRES2P6-201ENST00000567333 442 ntBASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 RCC2P3-201ENST00000418112 1537 ntBASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MEIS3P1A6NDR6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 PRKY-204ENST00000533551 1019 ntBASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 MYC-209ENST00000641252 345 ntBASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 KRT8P3-201ENST00000519669 1449 ntBASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms