Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 HMGA1P5-201ENST00000412453 271 ntBASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 SLC25A6P5-201ENST00000435663 894 ntBASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 AL512604.3-201ENST00000569583 964 ntBASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PCDHB18P-201ENST00000524813 2368 ntBASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYP46A1Q9Y6A2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 AC090340.1-201ENST00000620778 4980 ntBASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 SEC1P-202ENST00000473944 940 ntBASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 AC024243.1-201ENST00000609234 778 ntBASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 LETM1P2-201ENST00000597330 2178 ntBASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYP46A1Q9Y6A2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 AC066615.1-201ENST00000640911 628 ntBASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CYP46A1Q9Y6A2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 AL024508.2-201ENST00000607749 1894 ntBASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 LINC01568-207ENST00000641790 1380 ntBASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP46A1Q9Y6A2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms