Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 HBZP1-201ENST00000354915 429 ntBASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 HLA-F-220ENST00000434407 884 ntBASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 AL691432.3-201ENST00000621860 400 ntBASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 AC012313.10-201ENST00000623509 926 ntBASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 AL024508.2-201ENST00000607749 1894 ntBASIC18.48■□□□□ 0.55
RAI2Q9Y5P3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 ESPNP-201ENST00000270691 2015 ntBASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 AC083849.1-201ENST00000615227 514 ntBASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI2Q9Y5P3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 LINC01126-201ENST00000623515 1646 ntBASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.46■□□□□ 0.55
RAI2Q9Y5P3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms