Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HHLA3Q9XRX5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 KRT8P11-201ENST00000409686 1436 ntBASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 B3GAT3P1-201ENST00000471720 806 ntBASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 NUDT16P1-203ENST00000513809 620 ntBASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HHLA3Q9XRX5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HHLA3Q9XRX5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HHLA3Q9XRX5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 AC011506.1-201ENST00000474329 610 ntBASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 AC113410.3-201ENST00000623366 203 ntBASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 AC135776.1-201ENST00000319817 2481 ntBASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms