Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC116562.2-201ENST00000507042 360 ntBASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 MIR4674-201ENST00000582457 87 ntBASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 ITM2C-210ENST00000620962 501 ntBASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 AC036111.1-201ENST00000533973 1582 ntBASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 MIR3180-5-201ENST00000583743 153 ntBASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2BQ9UQN3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHMP2BQ9UQN3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 AC012313.1-201ENST00000593393 3059 ntBASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 CRYGFP-201ENST00000418459 633 ntBASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 TSPY20P-201ENST00000450910 630 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms