Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MIR564-202ENST00000385049 94 ntBASIC16.54■□□□□ 0.24
HINT3Q9NQE9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 GMCL1P1-201ENST00000463439 1581 ntBASIC16.54■□□□□ 0.24
HINT3Q9NQE9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HINT3Q9NQE9 PHGDH-209ENST00000641074 1780 ntBASIC16.54■□□□□ 0.24
HINT3Q9NQE9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 AC099343.3-201ENST00000605834 2503 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 AL023284.2-201ENST00000405850 579 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 B3GAT3P1-201ENST00000471720 806 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 MIR6786-201ENST00000616843 113 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 AC139713.2-201ENST00000641328 2723 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 KRT8P50-201ENST00000562022 1438 ntBASIC16.53■□□□□ 0.24
HINT3Q9NQE9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HINT3Q9NQE9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HINT3Q9NQE9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 GPAT2P1-201ENST00000444924 1672 ntBASIC16.52■□□□□ 0.23
HINT3Q9NQE9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HINT3Q9NQE9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms