Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTN4Q9NQC3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 CYP2T1P-201ENST00000432607 1285 ntBASIC21.56■■□□□ 1.04
RTN4Q9NQC3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 C2orf69P4-201ENST00000565394 541 ntBASIC21.56■■□□□ 1.04
RTN4Q9NQC3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN4Q9NQC3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 AC006015.1-201ENST00000429970 570 ntBASIC21.55■■□□□ 1.04
RTN4Q9NQC3 INGX-202ENST00000489074 768 ntBASIC21.55■■□□□ 1.04
RTN4Q9NQC3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4Q9NQC3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms