Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 LINC00602-201ENST00000629776 2065 ntBASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 KRT8P26-201ENST00000534154 1276 ntBASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 AC135050.7-201ENST00000624508 2218 ntBASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KCNMB3Q9NPA1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AC016734.2-201ENST00000624325 1377 ntBASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNMB3Q9NPA1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNMB3Q9NPA1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 AL354751.1-201ENST00000412768 1863 ntBASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 AC026471.1-201ENST00000564629 3026 ntBASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNMB3Q9NPA1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms