Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.4■□□□□ 0.86
VTA1Q9NP79 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 AC093909.1-201ENST00000504731 1122 ntBASIC20.4■□□□□ 0.86
VTA1Q9NP79 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.4■□□□□ 0.86
VTA1Q9NP79 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTA1Q9NP79 AC116562.4-201ENST00000641316 2276 ntBASIC20.39■□□□□ 0.86
VTA1Q9NP79 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.39■□□□□ 0.86
VTA1Q9NP79 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VTA1Q9NP79 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VTA1Q9NP79 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 AC073648.2-201ENST00000510116 352 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 MTDHP3-201ENST00000594186 672 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 AP001269.4-201ENST00000609611 512 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 AF228730.7-201ENST00000641842 219 ntBASIC20.39■□□□□ 0.85
VTA1Q9NP79 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.39■□□□□ 0.85
VTA1Q9NP79 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTA1Q9NP79 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.38■□□□□ 0.85
VTA1Q9NP79 PMS2P1-201ENST00000431037 1228 ntBASIC20.38■□□□□ 0.85
VTA1Q9NP79 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 SCARNA2-201ENST00000458748 420 ntBASIC20.38■□□□□ 0.85
VTA1Q9NP79 RNPS1P1-201ENST00000507437 918 ntBASIC20.38■□□□□ 0.85
VTA1Q9NP79 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
VTA1Q9NP79 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTA1Q9NP79 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTA1Q9NP79 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VTA1Q9NP79 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTA1Q9NP79 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTA1Q9NP79 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VTA1Q9NP79 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTA1Q9NP79 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.36■□□□□ 0.85
VTA1Q9NP79 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms