Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 MIR149-201ENST00000384879 89 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 AL390955.1-201ENST00000428694 934 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 AC009065.1-201ENST00000564055 1225 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 AC010653.2-201ENST00000623505 997 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 ESPNP-201ENST00000270691 2015 ntBASIC16.84■□□□□ 0.29
TRIM2Q9C040 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM2Q9C040 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM2Q9C040 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM2Q9C040 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TRIM2Q9C040 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.83■□□□□ 0.29
TRIM2Q9C040 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 NOC2LP2-201ENST00000407594 1944 ntBASIC16.83■□□□□ 0.28
TRIM2Q9C040 AC007663.1-201ENST00000438948 1240 ntBASIC16.83■□□□□ 0.28
TRIM2Q9C040 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 AC010331.1-201ENST00000611423 582 ntBASIC16.83■□□□□ 0.28
TRIM2Q9C040 AC009102.3-201ENST00000623118 1491 ntBASIC16.83■□□□□ 0.28
TRIM2Q9C040 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM2Q9C040 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM2Q9C040 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 TSPY14P-201ENST00000303979 915 ntBASIC16.82■□□□□ 0.28
TRIM2Q9C040 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.82■□□□□ 0.28
TRIM2Q9C040 EGLN1P1-201ENST00000531623 762 ntBASIC16.82■□□□□ 0.28
TRIM2Q9C040 NAPSB-206ENST00000562112 1266 ntBASIC16.82■□□□□ 0.28
TRIM2Q9C040 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 AC018470.1-201ENST00000624790 3129 ntBASIC16.82■□□□□ 0.28
TRIM2Q9C040 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM2Q9C040 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM2Q9C040 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms