Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RN7SL471P-201ENST00000580476 299 ntBASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFAF3Q9BU61 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NDUFAF3Q9BU61 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AL662844.4-201ENST00000606367 2838 ntBASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AC116351.2-201ENST00000606540 1585 ntBASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AC093525.10-201ENST00000625130 1569 ntBASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PCDHB19P-201ENST00000570871 2371 ntBASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFAF3Q9BU61 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 AC008550.1-201ENST00000511500 884 ntBASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms