Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDNQ99608 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
NDNQ99608 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 AL353719.1-201ENST00000566847 864 ntBASIC18.34■□□□□ 0.53
NDNQ99608 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.34■□□□□ 0.53
NDNQ99608 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.34■□□□□ 0.53
NDNQ99608 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.34■□□□□ 0.53
NDNQ99608 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDNQ99608 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NDNQ99608 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.34■□□□□ 0.53
NDNQ99608 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.33■□□□□ 0.53
NDNQ99608 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.33■□□□□ 0.53
NDNQ99608 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.33■□□□□ 0.53
NDNQ99608 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDNQ99608 AP000593.1-201ENST00000393668 712 ntBASIC18.33■□□□□ 0.52
NDNQ99608 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.33■□□□□ 0.52
NDNQ99608 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.33■□□□□ 0.52
NDNQ99608 CR769767.2-201ENST00000622735 460 ntBASIC18.33■□□□□ 0.52
NDNQ99608 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDNQ99608 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NDNQ99608 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.33■□□□□ 0.52
NDNQ99608 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
NDNQ99608 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NDNQ99608 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
NDNQ99608 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
NDNQ99608 KRT17P2-201ENST00000300992 1314 ntBASIC18.32■□□□□ 0.52
NDNQ99608 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.32■□□□□ 0.52
NDNQ99608 TSPY17P-201ENST00000450329 467 ntBASIC18.32■□□□□ 0.52
NDNQ99608 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.32■□□□□ 0.52
NDNQ99608 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.32■□□□□ 0.52
NDNQ99608 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.32■□□□□ 0.52
NDNQ99608 MIR4497-201ENST00000583208 89 ntBASIC18.32■□□□□ 0.52
NDNQ99608 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NDNQ99608 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
NDNQ99608 REXO1L9P-201ENST00000604264 2108 ntBASIC18.32■□□□□ 0.52
NDNQ99608 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDNQ99608 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms