Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF2Q99496 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF2Q99496 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF2Q99496 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF2Q99496 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF2Q99496 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
RNF2Q99496 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
RNF2Q99496 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF2Q99496 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RNF2Q99496 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF2Q99496 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RNF2Q99496 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RNF2Q99496 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RNF2Q99496 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
RNF2Q99496 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF2Q99496 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF2Q99496 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF2Q99496 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF2Q99496 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF2Q99496 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF2Q99496 RCC2P6-201ENST00000526625 1557 ntBASIC14.58□□□□□ -0.08
RNF2Q99496 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RNF2Q99496 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF2Q99496 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF2Q99496 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RNF2Q99496 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
RNF2Q99496 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 KSR1P1-201ENST00000446298 240 ntBASIC14.57□□□□□ -0.08
RNF2Q99496 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF2Q99496 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.57□□□□□ -0.08
RNF2Q99496 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 AC131212.4-201ENST00000623606 975 ntBASIC14.57□□□□□ -0.08
RNF2Q99496 CR392000.1-201ENST00000624770 1228 ntBASIC14.57□□□□□ -0.08
RNF2Q99496 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RNF2Q99496 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 AL135905.2-201ENST00000584934 1404 ntBASIC14.57□□□□□ -0.08
RNF2Q99496 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF2Q99496 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.57□□□□□ -0.08
RNF2Q99496 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF2Q99496 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNF2Q99496 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RNF2Q99496 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RNF2Q99496 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RNF2Q99496 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNF2Q99496 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RNF2Q99496 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNF2Q99496 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms