Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC105339.3-201ENST00000560043 636 ntBASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3BQ96NU0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 AL139400.1-201ENST00000366220 510 ntBASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 MCCD1P1-208ENST00000445732 328 ntBASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 CEND1P1-201ENST00000451006 455 ntBASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 C20orf181-201ENST00000623918 480 ntBASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 AL049796.1-201ENST00000565336 1766 ntBASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3BQ96NU0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 AJ011932.1-201ENST00000621707 465 ntBASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3BQ96NU0 AL353692.3-201ENST00000407031 1396 ntBASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 ELK2BP-201ENST00000415014 1224 ntBASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 KRT18P2-201ENST00000447938 1258 ntBASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms