Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 AC073912.3-201ENST00000624414 853 ntBASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 AP000997.3-201ENST00000623333 2250 ntBASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 GCSHP2-201ENST00000560971 527 ntBASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 AL157888.1-201ENST00000631930 593 ntBASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM5Q96HC4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 KRT18P55-202ENST00000578578 1546 ntBASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 AC034232.1-201ENST00000506026 1064 ntBASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PDLIM5Q96HC4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PDLIM5Q96HC4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms