Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC106730.1-201ENST00000566722 1090 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 AC139887.3-201ENST00000568585 713 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 AL138831.2-201ENST00000606564 490 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 AC243591.1-201ENST00000452967 1364 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 RPS2P28-201ENST00000314255 741 ntBASIC14.19□□□□□ -0.14
LINC01006Q8NI28 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 KRT18P13-201ENST00000400056 1290 ntBASIC14.19□□□□□ -0.14
LINC01006Q8NI28 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 AL049840.3-201ENST00000602669 611 ntBASIC14.19□□□□□ -0.14
LINC01006Q8NI28 AP001269.4-201ENST00000609611 512 ntBASIC14.19□□□□□ -0.14
LINC01006Q8NI28 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01006Q8NI28 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 AC125634.1-201ENST00000438758 1403 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 RPL13AP23-201ENST00000480739 586 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 AC011467.2-201ENST00000598425 242 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 MIR7706-201ENST00000613747 67 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 AC139530.3-201ENST00000620344 690 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 FAM215A-202ENST00000632077 792 ntBASIC14.18□□□□□ -0.14
LINC01006Q8NI28 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01006Q8NI28 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms