Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC148Q8NFR7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 AL024508.2-201ENST00000607749 1894 ntBASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 HLA-F-220ENST00000434407 884 ntBASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 AL590326.2-201ENST00000625139 305 ntBASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 ESPNP-201ENST00000270691 2015 ntBASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC148Q8NFR7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 HBZP1-201ENST00000354915 429 ntBASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 AL671277.2-201ENST00000458060 996 ntBASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 AC092597.1-201ENST00000487352 616 ntBASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 HYMAI.1-201ENST00000620949 238 ntBASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 LINC01311-201ENST00000565162 1445 ntBASIC21.04■□□□□ 0.96
CCDC148Q8NFR7 BCL2-203ENST00000589955 5011 ntBASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC148Q8NFR7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms