Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 LINC00167-201ENST00000530583 1419 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AL353692.3-201ENST00000407031 1396 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AC016734.2-201ENST00000624325 1377 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 BICD1-207ENST00000551848 1962 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 KRT8P26-201ENST00000534154 1276 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AL096828.2-201ENST00000567259 1965 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 AC132938.6-201ENST00000623828 1655 ntBASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LINC01555Q8NAE3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 UPK3BP1-201ENST00000428678 509 ntBASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 NEFHP1-201ENST00000412845 2629 ntBASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AC093010.1-201ENST00000473625 1624 ntBASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01555Q8NAE3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01555Q8NAE3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms