Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AL356488.2-201ENST00000602755 427 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AC140113.2-201ENST00000604370 208 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AL139424.1-201ENST00000607572 797 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 FAM197Y3-203ENST00000618346 717 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 AC098831.1-202ENST00000438821 336 ntBASIC19.73■□□□□ 0.75
HERC6Q8IVU3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERC6Q8IVU3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 AC021087.4-201ENST00000563761 564 ntBASIC19.72■□□□□ 0.75
HERC6Q8IVU3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 AC010327.4-202ENST00000591484 748 ntBASIC19.72■□□□□ 0.75
HERC6Q8IVU3 AL355385.1-201ENST00000606123 409 ntBASIC19.72■□□□□ 0.75
HERC6Q8IVU3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC6Q8IVU3 AL163051.1-201ENST00000569214 1512 ntBASIC19.71■□□□□ 0.75
HERC6Q8IVU3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 PMS2P2-201ENST00000425039 1128 ntBASIC19.71■□□□□ 0.75
HERC6Q8IVU3 AL591424.1-201ENST00000442569 1213 ntBASIC19.71■□□□□ 0.75
HERC6Q8IVU3 AC113404.2-201ENST00000507884 177 ntBASIC19.71■□□□□ 0.75
HERC6Q8IVU3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 FP475955.4-201ENST00000623131 1990 ntBASIC19.71■□□□□ 0.75
HERC6Q8IVU3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HERC6Q8IVU3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 RPSAP43-201ENST00000402237 625 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms