Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AC137761.2-201ENST00000561729 223 ntBASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AC145350.3-201ENST00000569033 163 ntBASIC15.21■□□□□ 0.03
ZNF546Q86UE3 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.21■□□□□ 0.03
ZNF546Q86UE3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 MTMR9LP-203ENST00000426597 1545 ntBASIC15.21■□□□□ 0.03
ZNF546Q86UE3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF546Q86UE3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF546Q86UE3 AC008556.1-201ENST00000610908 2040 ntBASIC15.21■□□□□ 0.02
ZNF546Q86UE3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 CYP2T1P-201ENST00000432607 1285 ntBASIC15.2■□□□□ 0.02
ZNF546Q86UE3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF546Q86UE3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.2■□□□□ 0.02
ZNF546Q86UE3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.19■□□□□ 0.02
ZNF546Q86UE3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms