Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP2Q5VXM1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 AC034105.1-201ENST00000563488 319 ntBASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 AC140113.2-201ENST00000604370 208 ntBASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP2Q5VXM1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AL032819.2-201ENST00000624543 2162 ntBASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 HLA-J-201ENST00000462773 1622 ntBASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AL356309.3-201ENST00000624132 1934 ntBASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AL591424.1-201ENST00000442569 1213 ntBASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP2Q5VXM1 AL158211.5-201ENST00000623583 2518 ntBASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 MYLKP1-201ENST00000509077 1580 ntBASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 AC098831.1-202ENST00000438821 336 ntBASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 OR7E14P-202ENST00000530490 1290 ntBASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCP2Q5VXM1 AC012640.2-201ENST00000561606 901 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms