Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 BNIP3P18-201ENST00000593976 575 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 AC104692.2-201ENST00000603054 253 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 AL589935.2-201ENST00000616471 1231 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 AC120498.9-201ENST00000339021 3867 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 AL022342.1-201ENST00000400363 863 ntBASIC19.3■□□□□ 0.68
VARS2Q5ST30 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARS2Q5ST30 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
VARS2Q5ST30 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AL031598.1-201ENST00000561511 1773 ntBASIC19.29■□□□□ 0.68
VARS2Q5ST30 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 POM121L3P-201ENST00000419331 1163 ntBASIC19.29■□□□□ 0.68
VARS2Q5ST30 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AC009078.2-202ENST00000463353 338 ntBASIC19.29■□□□□ 0.68
VARS2Q5ST30 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.29■□□□□ 0.68
VARS2Q5ST30 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AC009154.2-201ENST00000621177 724 ntBASIC19.29■□□□□ 0.68
VARS2Q5ST30 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VARS2Q5ST30 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.29■□□□□ 0.68
VARS2Q5ST30 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 AKR1C7P-201ENST00000305623 895 ntBASIC19.28■□□□□ 0.68
VARS2Q5ST30 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 AL160237.2-201ENST00000556165 472 ntBASIC19.28■□□□□ 0.68
VARS2Q5ST30 AC005336.2-201ENST00000593183 939 ntBASIC19.28■□□□□ 0.68
VARS2Q5ST30 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VARS2Q5ST30 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
VARS2Q5ST30 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VARS2Q5ST30 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms