Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CERKLQ49MI3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CERKLQ49MI3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.34■■□□□ 1.01
CERKLQ49MI3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CERKLQ49MI3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CERKLQ49MI3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CERKLQ49MI3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CERKLQ49MI3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CERKLQ49MI3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CERKLQ49MI3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 MTCL1P1-201ENST00000446207 792 ntBASIC21.33■■□□□ 1.01
CERKLQ49MI3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.33■■□□□ 1.01
CERKLQ49MI3 AL591684.3-201ENST00000605187 298 ntBASIC21.33■■□□□ 1.01
CERKLQ49MI3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CERKLQ49MI3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.33■■□□□ 1
CERKLQ49MI3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.33■■□□□ 1
CERKLQ49MI3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CERKLQ49MI3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CERKLQ49MI3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CERKLQ49MI3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CERKLQ49MI3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.32■■□□□ 1
CERKLQ49MI3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.32■■□□□ 1
CERKLQ49MI3 AF238378.1-201ENST00000526806 358 ntBASIC21.32■■□□□ 1
CERKLQ49MI3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.32■■□□□ 1
CERKLQ49MI3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.32■■□□□ 1
CERKLQ49MI3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.32■■□□□ 1
CERKLQ49MI3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.32■■□□□ 1
CERKLQ49MI3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CERKLQ49MI3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.32■■□□□ 1
CERKLQ49MI3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.32■■□□□ 1
CERKLQ49MI3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CERKLQ49MI3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.31■■□□□ 1
CERKLQ49MI3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CERKLQ49MI3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.31■■□□□ 1
CERKLQ49MI3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.31■■□□□ 1
CERKLQ49MI3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.31■■□□□ 1
CERKLQ49MI3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.31■■□□□ 1
CERKLQ49MI3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 AC114341.1-201ENST00000618070 349 ntBASIC21.31■■□□□ 1
CERKLQ49MI3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CERKLQ49MI3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.31■■□□□ 1
CERKLQ49MI3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CERKLQ49MI3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.31■■□□□ 1
CERKLQ49MI3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CERKLQ49MI3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.3■■□□□ 1
CERKLQ49MI3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.3■■□□□ 1
CERKLQ49MI3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CERKLQ49MI3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.3■■□□□ 1
CERKLQ49MI3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.3■■□□□ 1
CERKLQ49MI3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.3■■□□□ 1
CERKLQ49MI3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 AL031598.1-201ENST00000561511 1773 ntBASIC21.3■■□□□ 1
CERKLQ49MI3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CERKLQ49MI3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CERKLQ49MI3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CERKLQ49MI3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CERKLQ49MI3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CERKLQ49MI3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.29■■□□□ 1
CERKLQ49MI3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms