Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.07■□□□□ 0.64
EPHB3P54753 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 AC096582.2-201ENST00000510860 516 ntBASIC19.06■□□□□ 0.64
EPHB3P54753 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.06■□□□□ 0.64
EPHB3P54753 BNIP3P18-201ENST00000593976 575 ntBASIC19.06■□□□□ 0.64
EPHB3P54753 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.06■□□□□ 0.64
EPHB3P54753 AL591684.3-201ENST00000605187 298 ntBASIC19.06■□□□□ 0.64
EPHB3P54753 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EPHB3P54753 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
EPHB3P54753 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
EPHB3P54753 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
EPHB3P54753 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHB3P54753 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.05■□□□□ 0.64
EPHB3P54753 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
EPHB3P54753 AP002469.2-201ENST00000531724 424 ntBASIC19.05■□□□□ 0.64
EPHB3P54753 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.05■□□□□ 0.64
EPHB3P54753 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.05■□□□□ 0.64
EPHB3P54753 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 REXO1L6P-202ENST00000619970 1078 ntBASIC19.05■□□□□ 0.64
EPHB3P54753 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EPHB3P54753 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 LINC00602-201ENST00000629776 2065 ntBASIC19.05■□□□□ 0.64
EPHB3P54753 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHB3P54753 ANO7L1-203ENST00000602586 1720 ntBASIC19.05■□□□□ 0.64
EPHB3P54753 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHB3P54753 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHB3P54753 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
EPHB3P54753 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
EPHB3P54753 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EPHB3P54753 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
EPHB3P54753 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHB3P54753 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHB3P54753 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.04■□□□□ 0.64
EPHB3P54753 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.04■□□□□ 0.64
EPHB3P54753 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
EPHB3P54753 MIR5100-201ENST00000579544 119 ntBASIC19.04■□□□□ 0.64
EPHB3P54753 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHB3P54753 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EPHB3P54753 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.04■□□□□ 0.64
EPHB3P54753 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHB3P54753 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms