Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
LBX1P52954 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 COX5BP8-201ENST00000416911 349 ntBASIC20.55■□□□□ 0.88
LBX1P52954 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LBX1P52954 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.55■□□□□ 0.88
LBX1P52954 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LBX1P52954 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
LBX1P52954 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.55■□□□□ 0.88
LBX1P52954 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.55■□□□□ 0.88
LBX1P52954 AL353135.1-201ENST00000606729 504 ntBASIC20.55■□□□□ 0.88
LBX1P52954 AL589182.2-201ENST00000619332 1049 ntBASIC20.55■□□□□ 0.88
LBX1P52954 REXO1L3P-201ENST00000622202 1288 ntBASIC20.55■□□□□ 0.88
LBX1P52954 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.55■□□□□ 0.88
LBX1P52954 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LBX1P52954 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
LBX1P52954 PMPCAP1-201ENST00000508114 1576 ntBASIC20.55■□□□□ 0.88
LBX1P52954 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
LBX1P52954 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 CNN2P2-201ENST00000443536 909 ntBASIC20.54■□□□□ 0.88
LBX1P52954 CNN2P3-201ENST00000450201 906 ntBASIC20.54■□□□□ 0.88
LBX1P52954 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.54■□□□□ 0.88
LBX1P52954 RPS15P9-201ENST00000494093 319 ntBASIC20.54■□□□□ 0.88
LBX1P52954 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 AC051619.7-201ENST00000568314 623 ntBASIC20.54■□□□□ 0.88
LBX1P52954 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.54■□□□□ 0.88
LBX1P52954 AL136317.3-201ENST00000618497 906 ntBASIC20.54■□□□□ 0.88
LBX1P52954 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
LBX1P52954 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LBX1P52954 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LBX1P52954 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LBX1P52954 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LBX1P52954 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LBX1P52954 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 AL163051.1-201ENST00000569214 1512 ntBASIC20.53■□□□□ 0.88
LBX1P52954 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LBX1P52954 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LBX1P52954 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.53■□□□□ 0.88
LBX1P52954 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.53■□□□□ 0.88
LBX1P52954 IGHV3-71-201ENST00000523324 359 ntBASIC20.53■□□□□ 0.88
LBX1P52954 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.53■□□□□ 0.88
LBX1P52954 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.53■□□□□ 0.88
LBX1P52954 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 AC009093.7-201ENST00000623853 1223 ntBASIC20.53■□□□□ 0.88
LBX1P52954 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LBX1P52954 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LBX1P52954 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.52■□□□□ 0.88
LBX1P52954 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 RN7SL692P-201ENST00000464677 288 ntBASIC20.52■□□□□ 0.88
LBX1P52954 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.52■□□□□ 0.88
LBX1P52954 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.52■□□□□ 0.88
LBX1P52954 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.52■□□□□ 0.88
LBX1P52954 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LBX1P52954 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
LBX1P52954 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.52■□□□□ 0.87
LBX1P52954 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LBX1P52954 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
LBX1P52954 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LBX1P52954 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LBX1P52954 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.51■□□□□ 0.87
LBX1P52954 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms