Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PDX1P52945 IGHGP-201ENST00000390555 1178 ntBASIC17.74■□□□□ 0.43
PDX1P52945 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PDX1P52945 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDX1P52945 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 AC106795.1-205ENST00000512851 1056 ntBASIC17.74■□□□□ 0.43
PDX1P52945 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.74■□□□□ 0.43
PDX1P52945 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 AL592071.1-201ENST00000611956 408 ntBASIC17.74■□□□□ 0.43
PDX1P52945 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.74■□□□□ 0.43
PDX1P52945 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDX1P52945 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.74■□□□□ 0.43
PDX1P52945 CROCCP3-202ENST00000420820 1947 ntBASIC17.74■□□□□ 0.43
PDX1P52945 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDX1P52945 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
PDX1P52945 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDX1P52945 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
PDX1P52945 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDX1P52945 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.73■□□□□ 0.43
PDX1P52945 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.73■□□□□ 0.43
PDX1P52945 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.73■□□□□ 0.43
PDX1P52945 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.73■□□□□ 0.43
PDX1P52945 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.73■□□□□ 0.43
PDX1P52945 IGHV3-41-201ENST00000613121 348 ntBASIC17.73■□□□□ 0.43
PDX1P52945 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.73■□□□□ 0.43
PDX1P52945 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PDX1P52945 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDX1P52945 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDX1P52945 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.72■□□□□ 0.43
PDX1P52945 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PDX1P52945 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
PDX1P52945 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.72■□□□□ 0.43
PDX1P52945 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.72■□□□□ 0.43
PDX1P52945 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDX1P52945 IGHV3-47-201ENST00000425060 335 ntBASIC17.72■□□□□ 0.43
PDX1P52945 KRT16P4-201ENST00000453883 522 ntBASIC17.72■□□□□ 0.43
PDX1P52945 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.72■□□□□ 0.43
PDX1P52945 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.72■□□□□ 0.43
PDX1P52945 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.72■□□□□ 0.43
PDX1P52945 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PDX1P52945 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PDX1P52945 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.72■□□□□ 0.43
PDX1P52945 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDX1P52945 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDX1P52945 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.71■□□□□ 0.43
PDX1P52945 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms