Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC139887.3-201ENST00000568585 713 ntBASIC20.22■□□□□ 0.83
CPT1AP50416 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.22■□□□□ 0.83
CPT1AP50416 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CPT1AP50416 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.22■□□□□ 0.83
CPT1AP50416 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.22■□□□□ 0.83
CPT1AP50416 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPT1AP50416 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.22■□□□□ 0.83
CPT1AP50416 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPT1AP50416 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.22■□□□□ 0.83
CPT1AP50416 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CPT1AP50416 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.22■□□□□ 0.83
CPT1AP50416 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.21■□□□□ 0.83
CPT1AP50416 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.21■□□□□ 0.83
CPT1AP50416 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.21■□□□□ 0.83
CPT1AP50416 AC106730.1-201ENST00000566722 1090 ntBASIC20.21■□□□□ 0.83
CPT1AP50416 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.21■□□□□ 0.83
CPT1AP50416 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
CPT1AP50416 MIR7706-201ENST00000613747 67 ntBASIC20.21■□□□□ 0.83
CPT1AP50416 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.21■□□□□ 0.83
CPT1AP50416 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CPT1AP50416 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CPT1AP50416 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.21■□□□□ 0.83
CPT1AP50416 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.21■□□□□ 0.83
CPT1AP50416 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPT1AP50416 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.2■□□□□ 0.82
CPT1AP50416 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.2■□□□□ 0.82
CPT1AP50416 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.2■□□□□ 0.82
CPT1AP50416 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.2■□□□□ 0.82
CPT1AP50416 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.2■□□□□ 0.82
CPT1AP50416 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.2■□□□□ 0.82
CPT1AP50416 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.2■□□□□ 0.82
CPT1AP50416 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.2■□□□□ 0.82
CPT1AP50416 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.2■□□□□ 0.82
CPT1AP50416 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CPT1AP50416 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.2■□□□□ 0.82
CPT1AP50416 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.2■□□□□ 0.82
CPT1AP50416 FAM215A-202ENST00000632077 792 ntBASIC20.2■□□□□ 0.82
CPT1AP50416 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.2■□□□□ 0.82
CPT1AP50416 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CPT1AP50416 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPT1AP50416 LINC01126-201ENST00000623515 1646 ntBASIC20.2■□□□□ 0.82
CPT1AP50416 AL499627.1-201ENST00000569373 2188 ntBASIC20.19■□□□□ 0.82
CPT1AP50416 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
CPT1AP50416 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CPT1AP50416 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.19■□□□□ 0.82
CPT1AP50416 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.19■□□□□ 0.82
CPT1AP50416 KRT18P13-201ENST00000400056 1290 ntBASIC20.19■□□□□ 0.82
CPT1AP50416 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
CPT1AP50416 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.19■□□□□ 0.82
CPT1AP50416 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.19■□□□□ 0.82
CPT1AP50416 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.19■□□□□ 0.82
CPT1AP50416 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.19■□□□□ 0.82
CPT1AP50416 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPT1AP50416 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.19■□□□□ 0.82
CPT1AP50416 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.19■□□□□ 0.82
CPT1AP50416 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPT1AP50416 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPT1AP50416 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.18■□□□□ 0.82
CPT1AP50416 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPT1AP50416 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPT1AP50416 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPT1AP50416 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.18■□□□□ 0.82
CPT1AP50416 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPT1AP50416 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPT1AP50416 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.18■□□□□ 0.82
CPT1AP50416 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.18■□□□□ 0.82
CPT1AP50416 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.18■□□□□ 0.82
CPT1AP50416 ABCD1P5-201ENST00000445663 754 ntBASIC20.18■□□□□ 0.82
CPT1AP50416 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms