Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.02■□□□□ 0.64
MMP13P45452 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 SLC25A6P5-201ENST00000435663 894 ntBASIC19.02■□□□□ 0.64
MMP13P45452 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.02■□□□□ 0.64
MMP13P45452 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.02■□□□□ 0.64
MMP13P45452 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.02■□□□□ 0.64
MMP13P45452 AC012306.2-201ENST00000609350 630 ntBASIC19.02■□□□□ 0.64
MMP13P45452 CR769767.2-201ENST00000622735 460 ntBASIC19.02■□□□□ 0.64
MMP13P45452 AC097493.4-201ENST00000641197 219 ntBASIC19.02■□□□□ 0.64
MMP13P45452 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
MMP13P45452 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
MMP13P45452 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.02■□□□□ 0.63
MMP13P45452 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
MMP13P45452 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MMP13P45452 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.02■□□□□ 0.63
MMP13P45452 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
MMP13P45452 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 KRT8P45-201ENST00000414328 1447 ntBASIC19.01■□□□□ 0.63
MMP13P45452 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 MIR564-202ENST00000385049 94 ntBASIC19.01■□□□□ 0.63
MMP13P45452 AC211429.1-201ENST00000415277 523 ntBASIC19.01■□□□□ 0.63
MMP13P45452 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.01■□□□□ 0.63
MMP13P45452 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.01■□□□□ 0.63
MMP13P45452 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
MMP13P45452 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
MMP13P45452 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MMP13P45452 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP13P45452 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP13P45452 AC135776.1-201ENST00000319817 2481 ntBASIC19■□□□□ 0.63
MMP13P45452 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
MMP13P45452 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19■□□□□ 0.63
MMP13P45452 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19■□□□□ 0.63
MMP13P45452 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19■□□□□ 0.63
MMP13P45452 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19■□□□□ 0.63
MMP13P45452 WWOX-216ENST00000569818 525 ntBASIC19■□□□□ 0.63
MMP13P45452 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19■□□□□ 0.63
MMP13P45452 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
MMP13P45452 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MMP13P45452 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MMP13P45452 CEP83-AS1-201ENST00000623122 2482 ntBASIC19■□□□□ 0.63
MMP13P45452 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19■□□□□ 0.63
MMP13P45452 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19■□□□□ 0.63
MMP13P45452 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP13P45452 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19■□□□□ 0.63
MMP13P45452 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.99■□□□□ 0.63
MMP13P45452 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP13P45452 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MMP13P45452 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.99■□□□□ 0.63
MMP13P45452 SLC25A3P1-201ENST00000443844 931 ntBASIC18.99■□□□□ 0.63
MMP13P45452 AL512604.3-201ENST00000569583 964 ntBASIC18.99■□□□□ 0.63
MMP13P45452 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MMP13P45452 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP13P45452 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MMP13P45452 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms