Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLCN1P35523 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CLCN1P35523 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 AC068418.2-201ENST00000577309 3703 ntBASIC20.81■□□□□ 0.92
CLCN1P35523 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLCN1P35523 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 KRT18P16-201ENST00000510337 1294 ntBASIC20.81■□□□□ 0.92
CLCN1P35523 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCN1P35523 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CLCN1P35523 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CLCN1P35523 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN1P35523 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CLCN1P35523 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCN1P35523 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCN1P35523 AC233263.1-201ENST00000578059 224 ntBASIC20.8■□□□□ 0.92
CLCN1P35523 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCN1P35523 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCN1P35523 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 ZNF815P-204ENST00000434898 1737 ntBASIC20.8■□□□□ 0.92
CLCN1P35523 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN1P35523 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLCN1P35523 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN1P35523 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 KRT8P8-201ENST00000434750 1448 ntBASIC20.79■□□□□ 0.92
CLCN1P35523 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN1P35523 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN1P35523 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCN1P35523 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.79■□□□□ 0.92
CLCN1P35523 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN1P35523 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLCN1P35523 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCN1P35523 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CLCN1P35523 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCN1P35523 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms