Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PSMC3P17980 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
PSMC3P17980 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PSMC3P17980 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PSMC3P17980 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.05■□□□□ 0.64
PSMC3P17980 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.05■□□□□ 0.64
PSMC3P17980 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PSMC3P17980 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.05■□□□□ 0.64
PSMC3P17980 KRT89P-201ENST00000620027 1478 ntBASIC19.05■□□□□ 0.64
PSMC3P17980 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PSMC3P17980 KRT16P4-201ENST00000453883 522 ntBASIC19.05■□□□□ 0.64
PSMC3P17980 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.05■□□□□ 0.64
PSMC3P17980 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.05■□□□□ 0.64
PSMC3P17980 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.05■□□□□ 0.64
PSMC3P17980 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
PSMC3P17980 AC068587.9-201ENST00000641814 219 ntBASIC19.05■□□□□ 0.64
PSMC3P17980 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PSMC3P17980 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.04■□□□□ 0.64
PSMC3P17980 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
PSMC3P17980 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.04■□□□□ 0.64
PSMC3P17980 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.04■□□□□ 0.64
PSMC3P17980 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PSMC3P17980 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.04■□□□□ 0.64
PSMC3P17980 AC141586.3-201ENST00000562166 1838 ntBASIC19.04■□□□□ 0.64
PSMC3P17980 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.04■□□□□ 0.64
PSMC3P17980 AL353692.3-201ENST00000407031 1396 ntBASIC19.04■□□□□ 0.64
PSMC3P17980 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PSMC3P17980 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.04■□□□□ 0.64
PSMC3P17980 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PSMC3P17980 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 AC005082.1-201ENST00000413042 2259 ntBASIC19.03■□□□□ 0.64
PSMC3P17980 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 AC093503.3-201ENST00000624917 2352 ntBASIC19.03■□□□□ 0.64
PSMC3P17980 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PSMC3P17980 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PSMC3P17980 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PSMC3P17980 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PSMC3P17980 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PSMC3P17980 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PSMC3P17980 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
PSMC3P17980 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
PSMC3P17980 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms