Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.27■■□□□ 1.16
COL11A2P13942 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.27■■□□□ 1.16
COL11A2P13942 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.27■■□□□ 1.16
COL11A2P13942 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.27■■□□□ 1.16
COL11A2P13942 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.27■■□□□ 1.16
COL11A2P13942 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.27■■□□□ 1.16
COL11A2P13942 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.27■■□□□ 1.16
COL11A2P13942 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 KRT8P47-201ENST00000604727 1398 ntBASIC22.27■■□□□ 1.16
COL11A2P13942 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL11A2P13942 AC010460.3-201ENST00000511359 1579 ntBASIC22.26■■□□□ 1.15
COL11A2P13942 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL11A2P13942 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A2P13942 RFPL4AP1-201ENST00000530883 850 ntBASIC22.26■■□□□ 1.15
COL11A2P13942 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL11A2P13942 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL11A2P13942 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
COL11A2P13942 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.26■■□□□ 1.15
COL11A2P13942 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.26■■□□□ 1.15
COL11A2P13942 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
COL11A2P13942 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.26■■□□□ 1.15
COL11A2P13942 AC027612.4-201ENST00000605371 583 ntBASIC22.26■■□□□ 1.15
COL11A2P13942 AC073592.4-201ENST00000623827 446 ntBASIC22.26■■□□□ 1.15
COL11A2P13942 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.26■■□□□ 1.15
COL11A2P13942 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A2P13942 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A2P13942 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A2P13942 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 HTR5BP-201ENST00000430851 1154 ntBASIC22.25■■□□□ 1.15
COL11A2P13942 YBX1P5-201ENST00000509441 847 ntBASIC22.25■■□□□ 1.15
COL11A2P13942 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.25■■□□□ 1.15
COL11A2P13942 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.25■■□□□ 1.15
COL11A2P13942 MIR1199-201ENST00000621445 119 ntBASIC22.25■■□□□ 1.15
COL11A2P13942 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A2P13942 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
COL11A2P13942 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
COL11A2P13942 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.25■■□□□ 1.15
COL11A2P13942 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL11A2P13942 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL11A2P13942 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL11A2P13942 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.24■■□□□ 1.15
COL11A2P13942 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL11A2P13942 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
COL11A2P13942 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL11A2P13942 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.24■■□□□ 1.15
COL11A2P13942 CYMP-203ENST00000474680 1263 ntBASIC22.24■■□□□ 1.15
COL11A2P13942 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.24■■□□□ 1.15
COL11A2P13942 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.24■■□□□ 1.15
COL11A2P13942 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
COL11A2P13942 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
COL11A2P13942 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 SIGLEC16-201ENST00000599858 1437 ntBASIC22.23■■□□□ 1.15
COL11A2P13942 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.23■■□□□ 1.15
COL11A2P13942 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 AP000867.4-201ENST00000641616 219 ntBASIC22.23■■□□□ 1.15
COL11A2P13942 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 PMPCAP1-201ENST00000508114 1576 ntBASIC22.23■■□□□ 1.15
COL11A2P13942 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.23■■□□□ 1.15
COL11A2P13942 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
COL11A2P13942 MCCD1P2-201ENST00000423228 335 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms