Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC067852.2-201ENST00000590513 2313 ntBASIC17.83■□□□□ 0.45
CDH1P12830 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH1P12830 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH1P12830 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH1P12830 KRT8P7-201ENST00000533003 1432 ntBASIC17.83■□□□□ 0.45
CDH1P12830 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CDH1P12830 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.83■□□□□ 0.45
CDH1P12830 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH1P12830 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH1P12830 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDH1P12830 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH1P12830 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH1P12830 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH1P12830 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH1P12830 KRT18P57-201ENST00000443599 1254 ntBASIC17.83■□□□□ 0.44
CDH1P12830 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH1P12830 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.83■□□□□ 0.44
CDH1P12830 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 AC024243.1-201ENST00000609234 778 ntBASIC17.83■□□□□ 0.44
CDH1P12830 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CDH1P12830 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH1P12830 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH1P12830 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH1P12830 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH1P12830 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CDH1P12830 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.83■□□□□ 0.44
CDH1P12830 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH1P12830 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH1P12830 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH1P12830 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH1P12830 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CDH1P12830 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH1P12830 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.82■□□□□ 0.44
CDH1P12830 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.82■□□□□ 0.44
CDH1P12830 NEK4P2-201ENST00000580004 1012 ntBASIC17.82■□□□□ 0.44
CDH1P12830 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH1P12830 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH1P12830 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH1P12830 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.82■□□□□ 0.44
CDH1P12830 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH1P12830 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH1P12830 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH1P12830 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH1P12830 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH1P12830 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH1P12830 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH1P12830 AL023973.1-201ENST00000624619 620 ntBASIC17.81■□□□□ 0.44
CDH1P12830 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH1P12830 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms