Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC105339.3-201ENST00000560043 636 ntBASIC31.86■■■□□ 2.69
TOP2AP11388 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC31.86■■■□□ 2.69
TOP2AP11388 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC31.86■■■□□ 2.69
TOP2AP11388 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC31.86■■■□□ 2.69
TOP2AP11388 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC31.86■■■□□ 2.69
TOP2AP11388 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC31.86■■■□□ 2.69
TOP2AP11388 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC31.86■■■□□ 2.69
TOP2AP11388 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC31.86■■■□□ 2.69
TOP2AP11388 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC31.86■■■□□ 2.69
TOP2AP11388 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC31.86■■■□□ 2.69
TOP2AP11388 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 AC073621.1-201ENST00000392730 636 ntBASIC31.85■■■□□ 2.69
TOP2AP11388 AC007967.2-201ENST00000432613 625 ntBASIC31.85■■■□□ 2.69
TOP2AP11388 URGCP-206ENST00000446958 365 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 KRT18P3-201ENST00000451602 1288 ntBASIC31.85■■■□□ 2.69
TOP2AP11388 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC31.85■■■□□ 2.69
TOP2AP11388 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC31.85■■■□□ 2.69
TOP2AP11388 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC31.85■■■□□ 2.69
TOP2AP11388 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
TOP2AP11388 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC31.85■■■□□ 2.69
TOP2AP11388 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TOP2AP11388 CRCP-205ENST00000431089 942 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 AP001160.2-201ENST00000596071 487 ntBASIC31.85■■■□□ 2.69
TOP2AP11388 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
TOP2AP11388 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC31.84■■■□□ 2.69
TOP2AP11388 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC31.84■■■□□ 2.69
TOP2AP11388 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC31.84■■■□□ 2.69
TOP2AP11388 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC31.84■■■□□ 2.69
TOP2AP11388 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC31.84■■■□□ 2.69
TOP2AP11388 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TOP2AP11388 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC31.83■■■□□ 2.69
TOP2AP11388 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC31.83■■■□□ 2.69
TOP2AP11388 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TOP2AP11388 SIGLEC16-201ENST00000599858 1437 ntBASIC31.83■■■□□ 2.69
TOP2AP11388 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TOP2AP11388 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC31.83■■■□□ 2.69
TOP2AP11388 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TOP2AP11388 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC31.83■■■□□ 2.69
TOP2AP11388 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.83■■■□□ 2.69
TOP2AP11388 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC31.82■■■□□ 2.69
TOP2AP11388 PMPCAP1-201ENST00000508114 1576 ntBASIC31.82■■■□□ 2.69
TOP2AP11388 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
TOP2AP11388 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC31.82■■■□□ 2.68
TOP2AP11388 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC31.82■■■□□ 2.68
TOP2AP11388 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC31.82■■■□□ 2.68
TOP2AP11388 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
TOP2AP11388 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 PMS2P2-201ENST00000425039 1128 ntBASIC31.82■■■□□ 2.68
TOP2AP11388 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC31.82■■■□□ 2.68
TOP2AP11388 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
TOP2AP11388 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC31.82■■■□□ 2.68
TOP2AP11388 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TOP2AP11388 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC31.81■■■□□ 2.68
TOP2AP11388 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC31.81■■■□□ 2.68
TOP2AP11388 AC004967.1-201ENST00000453589 447 ntBASIC31.81■■■□□ 2.68
TOP2AP11388 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC31.81■■■□□ 2.68
TOP2AP11388 SDCCAG3P1-201ENST00000589292 1150 ntBASIC31.81■■■□□ 2.68
TOP2AP11388 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 AC010460.3-201ENST00000511359 1579 ntBASIC31.81■■■□□ 2.68
TOP2AP11388 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TOP2AP11388 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC31.81■■■□□ 2.68
TOP2AP11388 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC31.8■■■□□ 2.68
TOP2AP11388 GGCT-205ENST00000409436 954 ntTSL 3 BASIC31.8■■■□□ 2.68
TOP2AP11388 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
TOP2AP11388 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC31.8■■■□□ 2.68
TOP2AP11388 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms