Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SNX4O95219 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX4O95219 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 WWOX-216ENST00000569818 525 ntBASIC17.19■□□□□ 0.34
SNX4O95219 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNX4O95219 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SNX4O95219 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 KRT8P45-201ENST00000414328 1447 ntBASIC17.19■□□□□ 0.34
SNX4O95219 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX4O95219 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX4O95219 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX4O95219 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNX4O95219 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX4O95219 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX4O95219 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNX4O95219 GPAT2P1-201ENST00000444924 1672 ntBASIC17.18■□□□□ 0.34
SNX4O95219 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.18■□□□□ 0.34
SNX4O95219 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 AL023284.2-201ENST00000405850 579 ntBASIC17.18■□□□□ 0.34
SNX4O95219 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.18■□□□□ 0.34
SNX4O95219 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SNX4O95219 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SNX4O95219 COX11P1-201ENST00000489116 835 ntBASIC17.18■□□□□ 0.34
SNX4O95219 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.18■□□□□ 0.34
SNX4O95219 NEK4P2-201ENST00000580004 1012 ntBASIC17.18■□□□□ 0.34
SNX4O95219 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.18■□□□□ 0.34
SNX4O95219 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 AL512353.2-201ENST00000448759 1962 ntBASIC17.18■□□□□ 0.34
SNX4O95219 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNX4O95219 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.18■□□□□ 0.34
SNX4O95219 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNX4O95219 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX4O95219 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX4O95219 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 MIR1224-201ENST00000408193 85 ntBASIC17.17■□□□□ 0.34
SNX4O95219 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SNX4O95219 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.17■□□□□ 0.34
SNX4O95219 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNX4O95219 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 AL049597.2-201ENST00000565575 961 ntBASIC17.17■□□□□ 0.34
SNX4O95219 MIR4674-201ENST00000582457 87 ntBASIC17.17■□□□□ 0.34
SNX4O95219 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
SNX4O95219 AC140113.3-201ENST00000605663 199 ntBASIC17.17■□□□□ 0.34
SNX4O95219 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.17■□□□□ 0.34
SNX4O95219 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX4O95219 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX4O95219 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX4O95219 AL109659.2-201ENST00000606809 1674 ntBASIC17.16■□□□□ 0.34
SNX4O95219 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX4O95219 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX4O95219 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms