Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDRT1O95170 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDRT1O95170 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
CDRT1O95170 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDRT1O95170 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.33■□□□□ 0.2
CDRT1O95170 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDRT1O95170 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.33■□□□□ 0.2
CDRT1O95170 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.33■□□□□ 0.2
CDRT1O95170 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.33■□□□□ 0.2
CDRT1O95170 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 KRT8P45-201ENST00000414328 1447 ntBASIC16.33■□□□□ 0.2
CDRT1O95170 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDRT1O95170 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDRT1O95170 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.33■□□□□ 0.2
CDRT1O95170 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDRT1O95170 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.33■□□□□ 0.2
CDRT1O95170 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT1O95170 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT1O95170 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT1O95170 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.32■□□□□ 0.2
CDRT1O95170 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CDRT1O95170 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.32■□□□□ 0.2
CDRT1O95170 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDRT1O95170 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDRT1O95170 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT1O95170 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT1O95170 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.31■□□□□ 0.2
CDRT1O95170 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDRT1O95170 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDRT1O95170 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT1O95170 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDRT1O95170 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT1O95170 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.31■□□□□ 0.2
CDRT1O95170 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT1O95170 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDRT1O95170 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDRT1O95170 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
CDRT1O95170 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.31■□□□□ 0.2
CDRT1O95170 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms