Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC28A2O43868 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC28A2O43868 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.63■□□□□ 0.41
SLC28A2O43868 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC28A2O43868 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 AL031008.1-201ENST00000619963 541 ntBASIC17.63■□□□□ 0.41
SLC28A2O43868 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC28A2O43868 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.62■□□□□ 0.41
SLC28A2O43868 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 KRT18P13-201ENST00000400056 1290 ntBASIC17.62■□□□□ 0.41
SLC28A2O43868 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC28A2O43868 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SLC28A2O43868 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC28A2O43868 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC28A2O43868 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC28A2O43868 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC28A2O43868 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC28A2O43868 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC28A2O43868 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 STARP1-201ENST00000397973 869 ntBASIC17.61■□□□□ 0.41
SLC28A2O43868 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC28A2O43868 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 EMBP1-201ENST00000458200 901 ntBASIC17.61■□□□□ 0.41
SLC28A2O43868 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.61■□□□□ 0.41
SLC28A2O43868 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 AC117500.6-201ENST00000624871 588 ntBASIC17.61■□□□□ 0.41
SLC28A2O43868 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.61■□□□□ 0.41
SLC28A2O43868 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC28A2O43868 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC28A2O43868 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC28A2O43868 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms