Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
MSI1O43347 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MSI1O43347 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MSI1O43347 AC016734.2-201ENST00000624325 1377 ntBASIC18.96■□□□□ 0.63
MSI1O43347 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
MSI1O43347 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MSI1O43347 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.96■□□□□ 0.63
MSI1O43347 BX276092.5-203ENST00000456199 560 ntBASIC18.96■□□□□ 0.63
MSI1O43347 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.96■□□□□ 0.63
MSI1O43347 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.96■□□□□ 0.63
MSI1O43347 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.96■□□□□ 0.63
MSI1O43347 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.96■□□□□ 0.63
MSI1O43347 AC004263.2-201ENST00000617183 678 ntBASIC18.96■□□□□ 0.63
MSI1O43347 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 AC009113.1-201ENST00000570267 2443 ntBASIC18.96■□□□□ 0.63
MSI1O43347 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MSI1O43347 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSI1O43347 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
MSI1O43347 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MSI1O43347 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 GMCL1P1-201ENST00000463439 1581 ntBASIC18.95■□□□□ 0.62
MSI1O43347 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MSI1O43347 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.95■□□□□ 0.62
MSI1O43347 KRT8P26-201ENST00000534154 1276 ntBASIC18.95■□□□□ 0.62
MSI1O43347 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.95■□□□□ 0.62
MSI1O43347 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.95■□□□□ 0.62
MSI1O43347 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.95■□□□□ 0.62
MSI1O43347 AL121672.3-201ENST00000608644 468 ntBASIC18.95■□□□□ 0.62
MSI1O43347 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
MSI1O43347 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
MSI1O43347 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 KRT89P-201ENST00000620027 1478 ntBASIC18.95■□□□□ 0.62
MSI1O43347 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSI1O43347 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
MSI1O43347 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MSI1O43347 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.94■□□□□ 0.62
MSI1O43347 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
MSI1O43347 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
MSI1O43347 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 TSSC2-201ENST00000450217 709 ntBASIC18.94■□□□□ 0.62
MSI1O43347 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSI1O43347 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms