Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.17□□□□□ -0.46
RTL8CO15255 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTL8CO15255 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTL8CO15255 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTL8CO15255 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 RBM17P3-201ENST00000417687 1192 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.16□□□□□ -0.46
RTL8CO15255 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.16□□□□□ -0.46
RTL8CO15255 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 AC055717.3-201ENST00000622967 595 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.16□□□□□ -0.46
RTL8CO15255 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RTL8CO15255 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 IRX1P1-201ENST00000438849 1838 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.16□□□□□ -0.46
RTL8CO15255 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTL8CO15255 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTL8CO15255 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTL8CO15255 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 KRT8P50-201ENST00000562022 1438 ntBASIC12.15□□□□□ -0.46
RTL8CO15255 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 RPS2P28-201ENST00000314255 741 ntBASIC12.15□□□□□ -0.46
RTL8CO15255 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.15□□□□□ -0.46
RTL8CO15255 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.15□□□□□ -0.46
RTL8CO15255 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 AC068587.9-201ENST00000641814 219 ntBASIC12.15□□□□□ -0.46
RTL8CO15255 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.15□□□□□ -0.46
RTL8CO15255 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RTL8CO15255 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTL8CO15255 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.15□□□□□ -0.46
RTL8CO15255 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms