Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CASQ2O14958 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CASQ2O14958 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CASQ2O14958 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.39■□□□□ 0.37
CASQ2O14958 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.39■□□□□ 0.37
CASQ2O14958 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CASQ2O14958 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASQ2O14958 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.38■□□□□ 0.37
CASQ2O14958 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.38■□□□□ 0.37
CASQ2O14958 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.38■□□□□ 0.37
CASQ2O14958 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASQ2O14958 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.38■□□□□ 0.37
CASQ2O14958 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CASQ2O14958 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.38■□□□□ 0.37
CASQ2O14958 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CASQ2O14958 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASQ2O14958 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CASQ2O14958 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CASQ2O14958 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 AP006587.1-201ENST00000534129 1502 ntBASIC17.37■□□□□ 0.37
CASQ2O14958 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CASQ2O14958 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.37■□□□□ 0.37
CASQ2O14958 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CASQ2O14958 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 AC073210.2-201ENST00000430369 194 ntBASIC17.37■□□□□ 0.37
CASQ2O14958 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.37■□□□□ 0.37
CASQ2O14958 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.37■□□□□ 0.37
CASQ2O14958 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.37■□□□□ 0.37
CASQ2O14958 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.37■□□□□ 0.37
CASQ2O14958 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 AC011270.2-201ENST00000624293 2550 ntBASIC17.37■□□□□ 0.37
CASQ2O14958 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CASQ2O14958 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CASQ2O14958 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CASQ2O14958 AL096828.2-201ENST00000567259 1965 ntBASIC17.37■□□□□ 0.37
CASQ2O14958 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CASQ2O14958 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.37■□□□□ 0.37
CASQ2O14958 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CASQ2O14958 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CASQ2O14958 SUDS3P1-201ENST00000505831 966 ntBASIC17.36■□□□□ 0.37
CASQ2O14958 KRT18P16-201ENST00000510337 1294 ntBASIC17.36■□□□□ 0.37
CASQ2O14958 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.36■□□□□ 0.37
CASQ2O14958 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.36■□□□□ 0.37
CASQ2O14958 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASQ2O14958 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms