Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB4C9JG80 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 LIN28AP1-201ENST00000429574 405 ntBASIC16.18■□□□□ 0.18
NPIPB4C9JG80 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB4C9JG80 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.17■□□□□ 0.18
NPIPB4C9JG80 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 COX11P1-201ENST00000489116 835 ntBASIC16.17■□□□□ 0.18
NPIPB4C9JG80 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPIPB4C9JG80 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AP000997.3-201ENST00000623333 2250 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC132938.6-201ENST00000623828 1655 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 BX664615.1-201ENST00000443558 458 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 ATP5G1P1-201ENST00000448724 379 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 RASA4DP-201ENST00000460726 1199 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC010203.1-204ENST00000548782 407 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC005363.2-201ENST00000618631 242 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 LINC00167-201ENST00000530583 1419 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC099343.3-201ENST00000605834 2503 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 AC022898.2-201ENST00000616822 1312 ntBASIC16.16■□□□□ 0.18
NPIPB4C9JG80 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPB4C9JG80 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms