Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 UNC93B6-202ENST00000528242 690 ntBASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 MTDHP4-201ENST00000600287 670 ntBASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 SDHAP2-201ENST00000455183 2001 ntBASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC163A0A0D9SF12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 AC027796.2-201ENST00000575326 344 ntBASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 NKAPP1-205ENST00000585790 367 ntBASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 MTDHP5-201ENST00000598980 586 ntBASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC163A0A0D9SF12 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 PGM5P2-202ENST00000637225 1043 ntBASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 AP000867.4-201ENST00000641616 219 ntBASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC163A0A0D9SF12 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC163A0A0D9SF12 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 AC125437.2-201ENST00000625180 2167 ntBASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC163A0A0D9SF12 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms