Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 TSPY12P-201ENST00000421279 868 ntBASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AP000347.1-202ENST00000435868 847 ntBASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AP002469.2-201ENST00000531724 424 ntBASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRG3Q9Y2Y8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AL024508.2-201ENST00000607749 1894 ntBASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AC005082.1-201ENST00000413042 2259 ntBASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AL121912.1-201ENST00000603683 238 ntBASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PRG3Q9Y2Y8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 AC113404.2-201ENST00000507884 177 ntBASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 AC096582.2-201ENST00000510860 516 ntBASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 AC008687.5-201ENST00000593746 558 ntBASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 BNIP3P18-201ENST00000593976 575 ntBASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRG3Q9Y2Y8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 AC079776.4-201ENST00000511039 504 ntBASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.52■□□□□ 0.72
PRG3Q9Y2Y8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms