Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 KRT16P4-201ENST00000453883 522 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AC092183.1-201ENST00000469884 875 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AL671883.3-201ENST00000603274 991 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AL138831.2-201ENST00000606564 490 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 REXO1L6P-202ENST00000619970 1078 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AKR1C7P-201ENST00000305623 895 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 NUS1P2-201ENST00000417358 873 ntBASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 LINC00602-201ENST00000629776 2065 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 MTCL1P1-201ENST00000446207 792 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 SAPCD2P3-201ENST00000455031 850 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 MINOS1P3-201ENST00000457048 203 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 EMBP1-201ENST00000458200 901 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 LINC01711-201ENST00000598340 967 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 AL031008.1-201ENST00000619963 541 ntBASIC24.92■■□□□ 1.58
NINLQ9Y2I6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.92■■□□□ 1.58
NINLQ9Y2I6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NINLQ9Y2I6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.9■■□□□ 1.58
NINLQ9Y2I6 AC096582.2-201ENST00000510860 516 ntBASIC24.9■■□□□ 1.58
NINLQ9Y2I6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms