Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 AC132008.2-207ENST00000454517 770 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 MTDHP5-201ENST00000598980 586 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 Z83851.2-201ENST00000609564 659 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 MIR1199-201ENST00000621445 119 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 AL162377.1-201ENST00000618844 1793 ntBASIC17.3■□□□□ 0.36
LHX6Q9UPM6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AC092474.2-201ENST00000424288 719 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 SPCS2P1-201ENST00000561636 679 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AC009712.1-201ENST00000564938 316 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 GPR32P1-201ENST00000601788 811 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 AC104417.2-201ENST00000562989 1793 ntBASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX6Q9UPM6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 AC091607.1-201ENST00000490318 1060 ntBASIC17.28■□□□□ 0.36
LHX6Q9UPM6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX6Q9UPM6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.27■□□□□ 0.36
LHX6Q9UPM6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms