Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC093010.1-201ENST00000473625 1624 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AKR1C7P-201ENST00000305623 895 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC112698.1-201ENST00000510299 916 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AL121912.1-201ENST00000603683 238 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 AC126763.1-201ENST00000552015 2118 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 TP73-AS1-210ENST00000637775 1455 ntBASIC21.01■□□□□ 0.95
SYNPO2Q9UMS6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AC132938.6-201ENST00000623828 1655 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AC099343.3-201ENST00000605834 2503 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AC096582.2-201ENST00000510860 516 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 DUTP2-201ENST00000519164 463 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AL031008.1-201ENST00000619963 541 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 KRT8P10-201ENST00000450021 1447 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 AC097374.2-201ENST00000618617 1306 ntBASIC21■□□□□ 0.95
SYNPO2Q9UMS6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYNPO2Q9UMS6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 AL591684.3-201ENST00000605187 298 ntBASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 AC005082.1-201ENST00000413042 2259 ntBASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYNPO2Q9UMS6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.98■□□□□ 0.95
SYNPO2Q9UMS6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms